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ZMYND19 zinc finger MYND-type containing 19 [ Homo sapiens (human) ]

Gene ID: 116225, updated on 21-Dec-2019

Summary

Official Symbol
ZMYND19provided by HGNC
Official Full Name
zinc finger MYND-type containing 19provided by HGNC
Primary source
HGNC:HGNC:21146
See related
Ensembl:ENSG00000165724 MIM:611424
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MIZIP
Summary
ZMYND19 is a MYND zinc finger domain-containing protein that binds to the C terminus of melanin-concentrating hormone receptor-1 (MCHR1; MIM 601751) (Bachner et al., 2002 [PubMed 12208518]), and to the N termini of alpha-tubulin (TUBA1; MIM 191110), and beta-tubulin (TUBB; MIM 191130) (Francke et al., 2005 [PubMed 16039987]).[supplied by OMIM, Mar 2008]
Expression
Broad expression in testis (RPKM 12.2), skin (RPKM 4.6) and 25 other tissues See more
Orthologs

Genomic context

See ZMYND19 in Genome Data Viewer
Location:
9q34.3
Exon count:
8
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (137582079..137590512, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (140476531..140484937, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene Sharpr-MPRA regulatory region 4489 Neighboring gene diphthamide biosynthesis 7 Neighboring gene ARRDC1 antisense RNA 1 Neighboring gene arrestin domain containing 1 Neighboring gene euchromatic histone lysine methyltransferase 1 Neighboring gene SET pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
synapse IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
zinc finger MYND domain-containing protein 19
Names
MCH-R1-interacting zinc finger protein
melanin-concentrating hormone receptor 1 interacting zinc-finger protein
zinc finger, MYND domain containing 19

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_138462.3NP_612471.1  zinc finger MYND domain-containing protein 19

    See identical proteins and their annotated locations for NP_612471.1

    Status: VALIDATED

    Source sequence(s)
    AJ298882, AL365502, BU147462
    Consensus CDS
    CCDS7048.1
    UniProtKB/Swiss-Prot
    Q96E35
    Related
    ENSP00000298585.2, ENST00000298585.3
    Conserved Domains (2) summary
    pfam13392
    Location:66105
    HNH_3; HNH endonuclease
    pfam01753
    Location:174212
    zf-MYND; MYND finger

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    137582079..137590512 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005266052.4XP_005266109.1  zinc finger MYND domain-containing protein 19 isoform X1

    Conserved Domains (2) summary
    pfam01753
    Location:235273
    zf-MYND; MYND finger
    pfam13392
    Location:127166
    HNH_3; HNH endonuclease
  2. XM_017014255.1XP_016869744.1  zinc finger MYND domain-containing protein 19 isoform X2

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