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LOC116125307 4-coumarate--CoA ligase-like 6 [ Pistacia vera ]

Gene ID: 116125307, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116125307
Gene description
4-coumarate--CoA ligase-like 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Pistacia vera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Pistacia
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Genomic context

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See LOC116125307 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current PisVer_v2 (GCF_008641045.1) Unplaced Scaffold NW_022195071.1 (2287954..2291895, complement)

NW_022195071.1Genomic Context describing neighboring genes Neighboring gene CSC1-like protein At1g32090 Neighboring gene uncharacterized LOC116125884 Neighboring gene plastidal glycolate/glycerate translocator 1, chloroplastic Neighboring gene protein BASIC PENTACYSTEINE7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022195071 Unplaced Scaffold Reference PisVer_v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CoA-ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-coumarate--CoA ligase-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pistacia vera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PisVer_v2 Primary Assembly

Genomic

  1. NW_022195071.1 Reference PisVer_v2 Primary Assembly

    Range
    2287954..2291895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031411051.1 → XP_031266911.1  4-coumarate--CoA ligase-like 6

    Conserved Domains (1) summary
    PLN02574
    Location:19 → 569
    PLN02574; 4-coumarate--CoA ligase-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases