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LOC116106809 constitutive photomorphogenesis protein 10 [ Pistacia vera ]

Gene ID: 116106809, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116106809
Gene description
constitutive photomorphogenesis protein 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Pistacia vera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Pistacia
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Genomic context

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See LOC116106809 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current PisVer_v2 (GCF_008641045.1) Unplaced Scaffold NW_022196360.1 (70665..76995)

NW_022196360.1Genomic Context describing neighboring genes Neighboring gene probable polyamine transporter At3g13620 Neighboring gene F-box/kelch-repeat protein At2g44130-like Neighboring gene probable acyl-activating enzyme 18, peroxisomal Neighboring gene probable acyl-activating enzyme 18, peroxisomal

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196360 Unplaced Scaffold Reference PisVer_v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
constitutive photomorphogenesis protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pistacia vera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PisVer_v2 Primary Assembly

Genomic

  1. NW_022196360.1 Reference PisVer_v2 Primary Assembly

    Range
    70665..76995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031393125.1 → XP_031248985.1  constitutive photomorphogenesis protein 10 isoform X1

    Conserved Domains (1) summary
    cl00154
    Location:30 → 172
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  2. XM_031393126.1 → XP_031248986.1  constitutive photomorphogenesis protein 10 isoform X2

    Conserved Domains (1) summary
    pfam00179
    Location:31 → 133
    UQ_con; Ubiquitin-conjugating enzyme

RNA

  1. XR_004124360.1 RNA Sequence

  2. XR_004124361.1 RNA Sequence

Nucleotide Protein
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