U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC116017899 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 116017899, updated on 25-Jan-2024

Summary

Go to the top of the page Help
Gene symbol
LOC116017899
Gene description
histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC116017899 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 4 NC_044919.1 (35498718..35504188, complement)

Chromosome 4 - NC_044919.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116015374 Neighboring gene zinc finger CCCH domain-containing protein 53-like Neighboring gene histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like Neighboring gene ABC transporter G family member 15-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_044919.1 Chromosome 4 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044919.1 Reference ASM357664v1 Primary Assembly

    Range
    35498718..35504188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031258557.1 → XP_031114417.1  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like isoform X1

    Conserved Domains (2) summary
    pfam02182
    Location:327 → 468
    SAD_SRA; SAD/SRA domain
    cl40432
    Location:524 → 740
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

  2. XM_031258559.1 → XP_031114419.1  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like isoform X3

    Conserved Domains (2) summary
    pfam02182
    Location:298 → 439
    SAD_SRA; SAD/SRA domain
    cl40432
    Location:495 → 711
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

  3. XM_031258558.1 → XP_031114418.1  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like isoform X2

    Conserved Domains (2) summary
    pfam02182
    Location:326 → 467
    SAD_SRA; SAD/SRA domain
    cl40432
    Location:523 → 739
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases