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LOC115997300 galacturonokinase [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 115997300, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115997300
Gene description
galacturonokinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC115997300 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 11 NC_044926.1 (18731252..18741029, complement)

Chromosome 11 - NC_044926.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115996333 Neighboring gene GDSL esterase/lipase At3g48460-like Neighboring gene uncharacterized LOC115997628 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At3g47570

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044926.1 Chromosome 11 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galacturonokinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044926.1 Reference ASM357664v1 Primary Assembly

    Range
    18731252..18741029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031236832.1 → XP_031092692.1  galacturonokinase isoform X1

    Conserved Domains (1) summary
    PLN02865
    Location:8 → 436
    PLN02865; galactokinase

  2. XM_031236834.1 → XP_031092694.1  galacturonokinase isoform X3

    Conserved Domains (1) summary
    PLN02865
    Location:34 → 356
    PLN02865; galactokinase

  3. XM_031236833.1 → XP_031092693.1  galacturonokinase isoform X2

    Conserved Domains (1) summary
    PLN02865
    Location:29 → 373
    PLN02865; galactokinase
Nucleotide Protein
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