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LOC115989724 phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic-like [ Quercus lobata ]

Gene ID: 115989724, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115989724
Gene description
phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus lobata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Genomic context

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See LOC115989724 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ValleyOak3.0 (GCF_001633185.1) 5 NC_044908.1 (56969652..56986448, complement)

Chromosome 5 - NC_044908.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115992979 Neighboring gene uncharacterized LOC115990757 Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene uncharacterized LOC115988529 Neighboring gene inner centromere protein A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044908.1 Chromosome 5 Reference ValleyOak3.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic-like; probable phospholipid hydroperoxide glutathione peroxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ValleyOak3.0

Genomic

  1. NC_044908.1 Reference ValleyOak3.0

    Range
    56969652..56986448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031113557.1 → XP_030969417.1  probable phospholipid hydroperoxide glutathione peroxidase isoform X7

    UniProtKB/TrEMBL
    A0A7N2KTP5
    Conserved Domains (1) summary
    cl00388
    Location:1 → 220
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

  2. XM_031113550.1 → XP_030969410.1  probable phospholipid hydroperoxide glutathione peroxidase isoform X1

    UniProtKB/TrEMBL
    A0A7N2KTP5
    Conserved Domains (1) summary
    cl00388
    Location:1 → 220
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

  3. XM_031113556.1 → XP_030969416.1  phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic-like isoform X6

    UniProtKB/TrEMBL
    A0A7N2KTP5
    Conserved Domains (1) summary
    cl00388
    Location:1 → 228
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

  4. XM_031113555.1 → XP_030969415.1  phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic-like isoform X5

    UniProtKB/TrEMBL
    A0A7N2KTP5
    Conserved Domains (1) summary
    cl00388
    Location:1 → 229
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

  5. XM_031113553.1 → XP_030969413.1  probable phospholipid hydroperoxide glutathione peroxidase isoform X4

    UniProtKB/TrEMBL
    A0A7N2KTP5
    Conserved Domains (1) summary
    cl00388
    Location:1 → 225
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

  6. XM_031113552.1 → XP_030969412.1  probable phospholipid hydroperoxide glutathione peroxidase isoform X3

    UniProtKB/TrEMBL
    A0A7N2KTP5
    Conserved Domains (1) summary
    cl00388
    Location:1 → 220
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

  7. XM_031113551.1 → XP_030969411.1  probable phospholipid hydroperoxide glutathione peroxidase isoform X2

    UniProtKB/TrEMBL
    A0A7N2KTP5, A0A7N2LRS5
    Conserved Domains (1) summary
    cl00388
    Location:1 → 220
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
Nucleotide Protein
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