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HLCS holocarboxylase synthetase [ Strigops habroptila (Kakapo) ]

Gene ID: 115603744, updated on 17-Mar-2024

Summary

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Gene symbol
HLCS
Gene description
holocarboxylase synthetase
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See HLCS in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 2 NC_044278.2 (30475627..30599824, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 2 NC_044278.1 (11594306..11718503, complement)

Chromosome 2 - NC_044278.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115603746 Neighboring gene uncharacterized LOC115603747 Neighboring gene SIM bHLH transcription factor 2 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class P Neighboring gene tetratricopeptide repeat domain 3 Neighboring gene VPS26 endosomal protein sorting factor C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables biotin-[acetyl-CoA-carboxylase] ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
biotin--protein ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044278.2 Reference bStrHab1.2.pri

    Range
    30475627..30599824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030475964.1 → XP_030331824.1  biotin--protein ligase

    UniProtKB/TrEMBL
    A0A672V0M1
    Conserved Domains (2) summary
    cd16442
    Location:637 → 817
    BPL; biotin protein ligase
    cl00020
    Location:457 → 564
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain
Nucleotide Protein
Heading Accession and Version

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