U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TPHA0C04020 hypothetical protein [ Tetrapisispora phaffii CBS 4417 ]

Gene ID: 11533830, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
TPHA0C04020
Gene description
hypothetical protein
Locus tag
TPHA_0C04020
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_016522.1 (861629..863086, complement)

Chromosome 3 - NC_016522.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene mRNA turnover protein MRT4

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_016522.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT-0 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
hypothetical protein
XP_003684986.1
  • similar to Saccharomyces cerevisiae HSE1 (YHL002W); ancestral locus Anc_2.502

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016522.1 Reference assembly

    Range
    861629..863086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003684938.1 → XP_003684986.1  hypothetical protein TPHA_0C04020 [Tetrapisispora phaffii CBS 4417]

    See identical proteins and their annotated locations for XP_003684986.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8BQP0
    Conserved Domains (3) summary
    cd11805
    Location:233 → 285
    SH3_GRB2_like_C; C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins
    pfam03127
    Location:308 → 382
    GAT; GAT domain
    cl02544
    Location:5 → 145
    VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases