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TPHA0M00490 hypothetical protein [ Tetrapisispora phaffii CBS 4417 ]

Gene ID: 11531917, updated on 22-Oct-2023

Summary

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Gene symbol
TPHA0M00490
Gene description
hypothetical protein
Locus tag
TPHA_0M00490
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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Genomic context

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See TPHA0M00490 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_016532.1 (90239..91672, complement)

Chromosome 13 - NC_016532.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016532.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription export complex 2 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003688058.1
  • similar to Saccharomyces cerevisiae THP1 (YOL072W); ancestral locus Anc_3.141

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016532.1 Reference assembly

    Range
    90239..91672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003688010.1 → XP_003688058.1  hypothetical protein TPHA_0M00490 [Tetrapisispora phaffii CBS 4417]

    See identical proteins and their annotated locations for XP_003688058.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8C0W3
    Conserved Domains (1) summary
    cl02111
    Location:8 → 449
    PCI; PCI domain
Nucleotide Protein
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