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TPHA0K00600 hypothetical protein [ Tetrapisispora phaffii CBS 4417 ]

Gene ID: 11531584, updated on 22-Oct-2023

Summary

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Gene symbol
TPHA0K00600
Gene description
hypothetical protein
Locus tag
TPHA_0K00600
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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Genomic context

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Location:
chromosome: 11
Exon count:
1
Sequence:
Chromosome: 11; NC_016530.1 (122289..123383)

Chromosome 11 - NC_016530.1Genomic Context describing neighboring genes Neighboring gene tRNA-Phe Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016530.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIK complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003687628.1
  • similar to Saccharomyces cerevisiae CCL1 (YPR025C); ancestral locus Anc_7.431

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016530.1 Reference assembly

    Range
    122289..123383
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003687580.1 → XP_003687628.1  hypothetical protein TPHA_0K00600 [Tetrapisispora phaffii CBS 4417]

    See identical proteins and their annotated locations for XP_003687628.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8BZ66
    Conserved Domains (3) summary
    TIGR00569
    Location:25 → 318
    ccl1; cyclin ccl1
    cd00043
    Location:105 → 180
    CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
    pfam16899
    Location:191 → 314
    Cyclin_C_2; Cyclin C-terminal domain
Nucleotide Protein
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