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kcnh2b potassium voltage-gated channel, subfamily H (eag-related), member 2b [ Salmo trutta (river trout) ]

Gene ID: 115195628, updated on 17-Mar-2024

Summary

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Gene symbol
kcnh2b
Gene description
potassium voltage-gated channel, subfamily H (eag-related), member 2b
See related
Ensembl:ENSSTUG00000001901
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
zebrafish all
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Genomic context

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See kcnh2b in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 6 NC_042962.1 (20340739..20623980, complement)

Chromosome 6 - NC_042962.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115195625 Neighboring gene myosin-7-like Neighboring gene microtubule-associated protein 4-like Neighboring gene uncharacterized LOC115195630 Neighboring gene SCO-spondin Neighboring gene amine oxidase copper containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042962.1 Chromosome 6 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inward rectifier potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane repolarization during action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of heart rate by cardiac conduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of ventricular cardiac muscle cell membrane repolarization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potassium voltage-gated channel subfamily H member 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042962.1 Reference fSalTru1.1 Primary Assembly

    Range
    20340739..20623980 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029755692.1 → XP_029611552.1  potassium voltage-gated channel subfamily H member 2-like isoform X1

    UniProtKB/TrEMBL
    A0A673W4J2
    Related
    ENSSTUP00000003863.1, ENSSTUT00000004093.1
    Conserved Domains (3) summary
    cd00038
    Location:749 → 860
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00520
    Location:417 → 675
    Ion_trans; Ion transport protein
    pfam13426
    Location:29 → 134
    PAS_9; PAS domain

  2. XM_029755693.1 → XP_029611553.1  potassium voltage-gated channel subfamily H member 2-like isoform X2

    UniProtKB/TrEMBL
    A0A673W4J2
    Conserved Domains (2) summary
    cd00038
    Location:626 → 737
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00520
    Location:294 → 552
    Ion_trans; Ion transport protein
Nucleotide Protein
Heading Accession and Version

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