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LOC115164845 sodium-dependent serotonin transporter-like [ Salmo trutta (river trout) ]

Gene ID: 115164845, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115164845
Gene description
sodium-dependent serotonin transporter-like
See related
Ensembl:ENSSTUG00000014340
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115164845 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
13
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 27 NC_042983.1 (29487296..29504127)

Chromosome 27 - NC_042983.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 27 Neighboring gene small G protein signaling modulator 1a Neighboring gene uncharacterized LOC115164846 Neighboring gene ankyrin repeat domain-containing protein 13A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042983.1 Chromosome 27 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serotonin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serotonin:sodium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in serotonin uptake IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium-dependent serotonin transporter-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042983.1 Reference fSalTru1.1 Primary Assembly

    Range
    29487296..29504127
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029717703.1 → XP_029573563.1  sodium-dependent serotonin transporter-like

    UniProtKB/TrEMBL
    A0A673YGF8, A0A674CA56
    Related
    ENSSTUP00000033562.1, ENSSTUT00000035071.1
    Conserved Domains (1) summary
    cl00456
    Location:39 → 575
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
Heading Accession and Version

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