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TDEL0C04860 hypothetical protein [ Torulaspora delbrueckii ]

Gene ID: 11500710, updated on 25-Jan-2024

Summary

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Gene symbol
TDEL0C04860
Gene description
hypothetical protein
Locus tag
TDEL_0C04860
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Torulaspora delbrueckii (strain: type strain:CBS 1146)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Torulaspora
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Genomic context

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See TDEL0C04860 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_016503.1 (881043..882584)

Chromosome 3 - NC_016503.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016503.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Set3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_003680586.1
  • similar to Saccharomyces cerevisiae SIF2 (YBR103W); ancestral locus Anc_3.344

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016503.1 Reference assembly

    Range
    881043..882584
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003680538.1 → XP_003680586.1  hypothetical protein TDEL_0C04860 [Torulaspora delbrueckii]

    See identical proteins and their annotated locations for XP_003680586.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8ZS83
    Conserved Domains (4) summary
    COG2319
    Location:192 → 504
    WD40; WD40 repeat [General function prediction only]
    pfam08513
    Location:6 → 32
    LisH; LisH
    sd00039
    Location:157 → 209
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:211 → 452
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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