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TDEL0C02590 hypothetical protein [ Torulaspora delbrueckii ]

Gene ID: 11500483, updated on 21-Dec-2023

Summary

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Gene symbol
TDEL0C02590
Gene description
hypothetical protein
Locus tag
TDEL_0C02590
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Torulaspora delbrueckii (strain: type strain:CBS 1146)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Torulaspora
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Genomic context

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See TDEL0C02590 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_016503.1 (448900..450006, complement)

Chromosome 3 - NC_016503.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016503.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_003680359.1
  • similar to Saccharomyces cerevisiae RAD23 (YEL037C); ancestral locus Anc_1.480

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016503.1 Reference assembly

    Range
    448900..450006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003680311.1 → XP_003680359.1  hypothetical protein TDEL_0C02590 [Torulaspora delbrueckii]

    See identical proteins and their annotated locations for XP_003680359.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8ZRK6
    Conserved Domains (5) summary
    cd14378
    Location:121 → 167
    UBA1_Rhp23p_like; UBA1 domain of Schizosaccharomyces pombe UV excision repair protein Rhp23p and its homologs
    TIGR00601
    Location:2 → 368
    rad23; UV excision repair protein Rad23
    pfam09280
    Location:245 → 289
    XPC-binding; XPC-binding domain
    cl00155
    Location:2 → 72
    UBQ; Ubiquitin-like proteins
    cl21463
    Location:327 → 363
    UBA_like_SF; UBA domain-like superfamily
Nucleotide Protein
Heading Accession and Version

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