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LOC114966555 ATP-dependent RNA helicase DHX8-like [ Acropora millepora ]

Gene ID: 114966555, updated on 30-Nov-2023

Summary

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Gene symbol
LOC114966555
Gene description
ATP-dependent RNA helicase DHX8-like
See related
EnsemblRapid:LOC114966555
Gene type
protein coding
RefSeq status
MODEL
Organism
Acropora millepora
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Acroporidae; Acropora
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Genomic context

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Location:
chromosome: 2
Exon count:
24
Annotation release Status Assembly Chr Location
101 current Amil_v2.1 (GCF_013753865.1) 2 NC_058067.1 (30508124..30564458, complement)
100 previous assembly amil_sf_1.1 (GCF_004143615.1) Unplaced Scaffold NW_021126581.1 (323145..374904)

Chromosome 2 - NC_058067.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122957476 Neighboring gene PR domain zinc finger protein 14-like Neighboring gene uncharacterized LOC114966558 Neighboring gene 26S proteasome complex subunit SEM1-like Neighboring gene uncharacterized LOC122957477

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spliceosomal complex disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DHX8-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acropora millepora Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amil_v2.1

Genomic

  1. NC_058067.1 Reference Amil_v2.1

    Range
    30508124..30564458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029346465.2 → XP_029202298.2  ATP-dependent RNA helicase DHX8-like

    Related
    XP_029202298.2, XM_029346465.2
    Conserved Domains (4) summary
    COG1185
    Location:223 → 461
    Pnp; Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis]
    COG1643
    Location:508 → 1175
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd05684
    Location:227 → 305
    S1_DHX8_helicase; The N-terminal S1 domain of human ATP-dependent RNA helicase DHX8, a DEAH (Asp-Glu-Ala-His) box polypeptide. The DEAH-box RNA helicases are thought to play key roles in pre-mRNA splicing and DHX8 facilitates nuclear export of spliced mRNA by releasing ...
    pfam17069
    Location:121 → 212
    RSRP; Arginine/Serine-Rich protein 1
Nucleotide Protein
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