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LOC114321653 probable E3 ubiquitin-protein ligase LOG2 [ Camellia sinensis ]

Gene ID: 114321653, updated on 21-Dec-2023

Summary

Gene symbol
LOC114321653
Gene description
probable E3 ubiquitin-protein ligase LOG2
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

See LOC114321653 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021025263.1 (429122..435714, complement)

NW_021025263.1Genomic Context describing neighboring genes Neighboring gene dystrophia myotonica WD repeat-containing protein-like Neighboring gene uncharacterized LOC114321652 Neighboring gene ribonuclease II, chloroplastic/mitochondrial-like Neighboring gene DNA-directed RNA polymerase II subunit 1-like

Genomic regions, transcripts, and products

Genomic Sequence:
NW_021025263 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

General protein information

Preferred Names
probable E3 ubiquitin-protein ligase LOG2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021025263.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    429122..435714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028268843.1XP_028124644.1  probable E3 ubiquitin-protein ligase LOG2 isoform X3

    UniProtKB/TrEMBL
    A0A7J7GLB6
    Conserved Domains (2) summary
    cd16789
    Location:317357
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:265359
    KilA-N; KilA-N domain
  2. XM_028268841.1XP_028124642.1  probable E3 ubiquitin-protein ligase LOG2 isoform X1

    UniProtKB/TrEMBL
    A0A7J7GLB6
    Conserved Domains (2) summary
    cd16789
    Location:300340
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:248342
    KilA-N; KilA-N domain
  3. XM_028268842.1XP_028124643.1  probable E3 ubiquitin-protein ligase LOG2 isoform X2

    UniProtKB/TrEMBL
    A0A7J7GLB6
    Conserved Domains (2) summary
    cd16789
    Location:309349
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:257351
    KilA-N; KilA-N domain