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LOC114270749 probable aquaporin TIP-type RB7-18C [ Camellia sinensis ]

Gene ID: 114270749, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114270749
Gene description
probable aquaporin TIP-type RB7-18C
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
Also known as
TIP2-2
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Genomic context

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See LOC114270749 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021024631.1 (570161..573588, complement)

NW_021024631.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent DNA helicase PIF2-like Neighboring gene formyltetrahydrofolate deformylase 1, mitochondrial-like Neighboring gene uncharacterized LOC114270760 Neighboring gene uncharacterized LOC114270773

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021024631 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome and metabolite analysis identifies nitrogen utilization genes in tea plant (Camellia sinensis). Li W, et al. Sci Rep, 2017 May 10. PMID 28490757, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables water channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in water transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type vacuole membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable aquaporin TIP-type RB7-18C
Names
aquaporin protein TIP2-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021024631.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    570161..573588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028212337.1 → XP_028068138.1  probable aquaporin TIP-type RB7-18C

    UniProtKB/TrEMBL
    A0A3G1VD05
    Conserved Domains (1) summary
    cl00200
    Location:1 → 250
    MIP; Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal ...
Nucleotide Protein
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