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LOC114174214 AT-rich interactive domain-containing protein 6-like [ Vigna unguiculata (cowpea) ]

Gene ID: 114174214, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114174214
Gene description
AT-rich interactive domain-containing protein 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna unguiculata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC114174214 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM411807v1 (GCF_004118075.1) 2 NC_040280.1 (26488239..26494974)

Chromosome 2 - NC_040280.1Genomic Context describing neighboring genes Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene protein PIN-LIKES 3-like Neighboring gene uncharacterized LOC114172986 Neighboring gene thioredoxin reductase NTRB-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040280.1 Chromosome 2 Reference ASM411807v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AT-rich interactive domain-containing protein 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vigna unguiculata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM411807v1 Primary Assembly

Genomic

  1. NC_040280.1 Reference ASM411807v1 Primary Assembly

    Range
    26488239..26494974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028059005.1 → XP_027914806.1  AT-rich interactive domain-containing protein 6-like

    UniProtKB/TrEMBL
    A0A4D6LQR8
    Conserved Domains (2) summary
    cd06464
    Location:449 → 529
    ACD_sHsps-like; Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally ...
    smart00501
    Location:239 → 327
    BRIGHT; ARID (A/T-rich interaction domain) domain
Nucleotide Protein
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