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cacng7b calcium channel, voltage-dependent, gamma subunit 7b [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114142375, updated on 15-Mar-2024

Summary

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Gene symbol
cacng7b
Gene description
calcium channel, voltage-dependent, gamma subunit 7b
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 3 NC_040230.1 (13466812..13484063, complement)

Chromosome 3 - NC_040230.1Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, gamma subunit 6b Neighboring gene calcium channel, voltage-dependent, gamma subunit 8b Neighboring gene protein kinase C, gamma Neighboring gene glutamate receptor ionotropic, NMDA 2D-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040230.1 Chromosome 3 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter receptor internalization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter receptor transport, postsynaptic endosome to lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postsynaptic neurotransmitter receptor diffusion trapping IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of AMPA receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmission of nerve impulse IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent calcium channel gamma-7 subunit-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040230.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    13466812..13484063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028013635.1 → XP_027869436.1  voltage-dependent calcium channel gamma-7 subunit-like

    UniProtKB/TrEMBL
    A0A3B5MQE5
    Conserved Domains (1) summary
    cl21598
    Location:18 → 195
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
Heading Accession and Version

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