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LOC114134301 tyrosine-protein kinase fyna-like [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114134301, updated on 11-Apr-2024

Summary

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Gene symbol
LOC114134301
Gene description
tyrosine-protein kinase fyna-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 19 NC_040246.1 (7809982..7832185, complement)

Chromosome 19 - NC_040246.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114134442 Neighboring gene neurofilament heavy polypeptide-like Neighboring gene muscle M-line assembly protein unc-89-like Neighboring gene myristoylated alanine-rich protein kinase C substrate b Neighboring gene uncharacterized LOC114134094 Neighboring gene collagen, type X, alpha 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040246.1 Chromosome 19 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables non-membrane spanning protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein kinase fyna-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040246.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    7809982..7832185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028000813.1 → XP_027856614.1  tyrosine-protein kinase fyna-like

    UniProtKB/TrEMBL
    A0A3B5L325
    Conserved Domains (3) summary
    cd12006
    Location:85 → 140
    SH3_Fyn_Yrk; Src homology 3 domain of Fyn and Yrk Protein Tyrosine Kinases
    cd05070
    Location:261 → 534
    PTKc_Fyn; Catalytic domain of the Protein Tyrosine Kinase, Fyn
    cl15255
    Location:145 → 245
    SH2; Src homology 2 (SH2) domain
Nucleotide Protein
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