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LOC11411269 phosphoinositide phospholipase C 2 [ Medicago truncatula (barrel medic) ]

Gene ID: 11411269, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11411269
Gene description
phosphoinositide phospholipase C 2
Locus tag
MtrunA17_Chr3g0113531
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
Also known as
PLC1
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Genomic context

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See LOC11411269 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 3 NC_053044.1 (35200654..35205405)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 3 NC_016409.2 (31707224..31712000)

Chromosome 3 - NC_053044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112419870 Neighboring gene phosphoinositide phospholipase C 6 Neighboring gene probable pectate lyase 5 Neighboring gene DNA-directed RNA polymerases I and III subunit RPAC2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoinositide phospholipase C 2
Names
phosphatidylinositol-specific phospholipase C
phosphoinositide-specific phospholipase C
putative phosphoinositide phospholipase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053044.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    35200654..35205405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024779229.2 → XP_024634997.1  phosphoinositide phospholipase C 2 isoform X2

    UniProtKB/TrEMBL
    A0A072UYB6, A0A072UZD3
    Conserved Domains (1) summary
    cl27705
    Location:7 → 497
    PI-PLC-Y; Phosphatidylinositol-specific phospholipase C, Y domain

  2. XM_003600856.4 → XP_003600904.1  phosphoinositide phospholipase C 2 isoform X1

    See identical proteins and their annotated locations for XP_003600904.1

    UniProtKB/TrEMBL
    Q93YX8
    Conserved Domains (1) summary
    cl27705
    Location:7 → 593
    PI-PLC-Y; Phosphatidylinositol-specific phospholipase C, Y domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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