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cga glycoprotein hormones, alpha polypeptide [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113538808, updated on 15-Mar-2024

Summary

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Gene symbol
cga
Gene description
glycoprotein hormones, alpha polypeptide
Locus tag
PHYPO_G00014620
See related
EnsemblRapid:ENSPHYG00025006356
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
zebrafish all
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Genomic context

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See cga in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 10 NC_069719.1 (11525274..11526437)

Chromosome 10 - NC_069719.1Genomic Context describing neighboring genes Neighboring gene sorting nexin-14 Neighboring gene synaptotagmin binding, cytoplasmic RNA interacting protein, like Neighboring gene zinc finger protein 292a Neighboring gene origin recognition complex, subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069719.1 Chromosome 10 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables follicle-stimulating hormone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of steroid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in thyroid hormone generation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of follicle-stimulating hormone complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein hormones alpha chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069719.1 Reference fPanHyp1.pri

    Range
    11525274..11526437
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026934199.3 → XP_026790000.1  glycoprotein hormones alpha chain

    UniProtKB/TrEMBL
    A0A5N5N5Z6
    Related
    ENSPHYP00025013752.1, ENSPHYT00025015054.1
    Conserved Domains (1) summary
    pfam00236
    Location:26 → 109
    Hormone_6; Glycoprotein hormone
Nucleotide Protein
Heading Accession and Version

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