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MISP3 MISP family member 3 [ Homo sapiens (human) ]

Gene ID: 113230, updated on 14-Dec-2021

Summary

Official Symbol
MISP3provided by HGNC
Official Full Name
MISP family member 3provided by HGNC
Primary source
HGNC:HGNC:26963
See related
Ensembl:ENSG00000141854
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in kidney (RPKM 7.9), colon (RPKM 7.2) and 23 other tissues See more
Orthologs
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Genomic context

See MISP3 in Genome Data Viewer
Location:
19p13.12
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (14072786..14075062)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (14183598..14185874)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene paralemmin 3 Neighboring gene eukaryotic translation elongation factor 1 delta pseudogene 1 Neighboring gene microRNA 1199 Neighboring gene chromosome 19 open reading frame 67 Neighboring gene sterile alpha motif domain containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
uncharacterized protein MISP3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001291291.2NP_001278220.1  uncharacterized protein MISP3 isoform 1

    See identical proteins and their annotated locations for NP_001278220.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the shorter transcript and encodes the protein.
    Source sequence(s)
    AC022098, BC011002
    Consensus CDS
    CCDS77246.1
    UniProtKB/Swiss-Prot
    Q96FF7
    Related
    ENSP00000465157.1, ENST00000587086.3
    Conserved Domains (1) summary
    pfam15304
    Location:37208
    AKAP2_C; A-kinase anchor protein 2 C-terminus
  2. NM_001393577.1NP_001380506.1  uncharacterized protein MISP3 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC022098

RNA

  1. NR_111941.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site at an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AC022098

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    14072786..14075062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_021160022.1 Reference GRCh38.p13 PATCHES

    Range
    284627..286903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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