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LOC113035985 heterogeneous nuclear ribonucleoprotein A/B-like [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113035985, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113035985
Gene description
heterogeneous nuclear ribonucleoprotein A/B-like
See related
Ensembl:ENSACLG00000007958
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 2 NC_039303.1 (27725974..27729305, complement)

Chromosome 2 - NC_039303.1Genomic Context describing neighboring genes Neighboring gene leukocyte elastase inhibitor-like Neighboring gene protein FAM53C-like Neighboring gene 5-phosphohydroxy-L-lysine phospho-lyase-like Neighboring gene nucleoside diphosphate kinase homolog 5-like Neighboring gene guanine nucleotide-binding protein subunit beta-2-like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039303.1 Chromosome 2 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein A/B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039303.1 Reference fAstCal1.2 Primary Assembly

    Range
    27725974..27729305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026191935.1 → XP_026047720.1  heterogeneous nuclear ribonucleoprotein A/B-like

    UniProtKB/TrEMBL
    A0A3P8P372, A0A3P8P3M1
    Related
    ENSACLP00000011636.1, ENSACLT00000011921.1
    Conserved Domains (3) summary
    pfam08143
    Location:1 → 75
    CBFNT; CBFNT (NUC161) domain
    cd12757
    Location:71 → 150
    RRM1_hnRNPAB; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
    cl17169
    Location:155 → 234
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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