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LOC113027488 poly(U)-specific endoribonuclease-C-like [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113027488, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113027488
Gene description
poly(U)-specific endoribonuclease-C-like
See related
Ensembl:ENSACLG00000002802
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
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Genomic context

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See LOC113027488 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 7 NC_039308.1 (63406034..63411771, complement)

Chromosome 7 - NC_039308.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology-like domain, family A, member 2 Neighboring gene golgin subfamily A member 6-like protein 6 Neighboring gene oxysterol binding protein-like 5 Neighboring gene protein tyrosine phosphatase receptor type Jb, tandem duplicate 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039308.1 Chromosome 7 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
poly(U)-specific endoribonuclease-C-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039308.1 Reference fAstCal1.2 Primary Assembly

    Range
    63406034..63411771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026177108.1 → XP_026032893.1  poly(U)-specific endoribonuclease-C-like

    UniProtKB/TrEMBL
    A0A3P8NHC9
    Related
    ENSACLP00000004179.1, ENSACLT00000004267.1
    Conserved Domains (1) summary
    pfam09412
    Location:27 → 298
    XendoU; Endoribonuclease XendoU
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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