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LOC112744629 UDP-arabinopyranose mutase 1 [ Arachis hypogaea (peanut) ]

Gene ID: 112744629, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112744629
Gene description
UDP-arabinopyranose mutase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112744629 in Genome Data Viewer
Location:
chromosome: Arahy.14
Exon count:
4
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.14 NC_037631.1 (139218855..139221802, complement)

Chromosome Arahy.14 - NC_037631.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At5g14770, mitochondrial Neighboring gene probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 Neighboring gene cytochrome P450 85A Neighboring gene uncharacterized LOC112744631

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037631.1 Chromosome Arahy.14 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037631.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    139218855..139221802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025794304.1 → XP_025650089.1  UDP-arabinopyranose mutase 1

    Conserved Domains (1) summary
    PLN03180
    Location:7 → 345
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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