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LOC112559472 DNA ligase 1-like [ Pomacea canaliculata ]

Gene ID: 112559472, updated on 9-Nov-2023

Summary

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Gene symbol
LOC112559472
Gene description
DNA ligase 1-like
See related
EnsemblRapid:LOC112559472
Gene type
protein coding
RefSeq status
MODEL
Organism
Pomacea canaliculata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Caenogastropoda; Architaenioglossa; Ampullarioidea; Ampullariidae; Pomacea
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Genomic context

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Location:
chromosome: LG3
Exon count:
23
Annotation release Status Assembly LG Location
100 current ASM307304v1 (GCF_003073045.1) LG3 NC_037592.1 (34405196..34436065, complement)

Linkage Group LG3 - NC_037592.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112559471 Neighboring gene prominin-1-like Neighboring gene 26S proteasome non-ATPase regulatory subunit 12-like Neighboring gene complement C1q subcomponent subunit B-like Neighboring gene transmembrane protein 184B-like Neighboring gene UNC93-like protein MFSD11 Neighboring gene serine/arginine-rich splicing factor 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037592.1 Chromosome LG3 Reference ASM307304v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA ligase (ATP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Okazaki fragment processing involved in mitotic DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lagging strand elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: DNA ligase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pomacea canaliculata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM307304v1 Primary Assembly

Genomic

  1. NC_037592.1 Reference ASM307304v1 Primary Assembly

    Range
    34405196..34436065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025230762.1 → XP_025086547.1  LOW QUALITY PROTEIN: DNA ligase 1-like

    Related
    XP_025086547.1, XM_025230762.1
    Conserved Domains (1) summary
    cl25417
    Location:33 → 736
    CDC9; ATP-dependent DNA ligase [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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