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NXPH3 neurexophilin 3 [ Homo sapiens (human) ]

Gene ID: 11248, updated on 13-Mar-2020

Summary

Official Symbol
NXPH3provided by HGNC
Official Full Name
neurexophilin 3provided by HGNC
Primary source
HGNC:HGNC:8077
See related
Ensembl:ENSG00000182575 MIM:604636
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NPH3
Expression
Broad expression in brain (RPKM 6.5), endometrium (RPKM 3.8) and 18 other tissues See more
Orthologs

Genomic context

See NXPH3 in Genome Data Viewer
Location:
17q21.33
Exon count:
2
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (49575871..49583827)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (47653298..47661172)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2075 Neighboring gene uncharacterized LOC100288866 Neighboring gene nerve growth factor receptor Neighboring gene microRNA 6165 Neighboring gene uncharacterized LOC107984999 Neighboring gene speckle type BTB/POZ protein Neighboring gene solute carrier family 35 member B1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
signaling receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
neuropeptide signaling pathway NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
extracellular region IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007225.4NP_009156.2  neurexophilin-3 precursor

    See identical proteins and their annotated locations for NP_009156.2

    Status: VALIDATED

    Source sequence(s)
    AA325150, AB032985, AC006487
    Consensus CDS
    CCDS11550.1
    UniProtKB/Swiss-Prot
    O95157
    Related
    ENSP00000329295.5, ENST00000328741.5
    Conserved Domains (1) summary
    pfam06312
    Location:59252
    Neurexophilin; Neurexophilin

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    49575871..49583827
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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