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LOC112259587 epidermal retinol dehydrogenase 2-like [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112259587, updated on 7-Dec-2023

Summary

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Gene symbol
LOC112259587
Gene description
epidermal retinol dehydrogenase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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Location:
chromosome: LG10
Exon count:
5
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG10 NC_056438.1 (49218403..49223678, complement)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 10 NC_037106.1 (34458319..34463586, complement)

Linkage Group LG10 - NC_056438.1Genomic Context describing neighboring genes Neighboring gene choline transporter-like protein 5-A Neighboring gene epidermal retinol dehydrogenase 2 Neighboring gene proenkephalin a Neighboring gene 3'(2'), 5'-bisphosphate nucleotidase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epidermal retinol dehydrogenase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056438.1 Reference Otsh_v2.0 Primary Assembly

    Range
    49218403..49223678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042329578.1 → XP_042185512.1  epidermal retinol dehydrogenase 2-like

    Conserved Domains (1) summary
    cl21454
    Location:2 → 103
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases