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LOC112228413 metalloreductase STEAP4-like [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112228413, updated on 7-Dec-2023

Summary

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Gene symbol
LOC112228413
Gene description
metalloreductase STEAP4-like
See related
EnsemblRapid:ENSOTSG00005010313
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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Location:
chromosome: LG03
Exon count:
10
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG03 NC_056431.1 (15784925..15805891)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 3 NC_037099.1 (12352275..12373189)

Linkage Group LG03 - NC_056431.1Genomic Context describing neighboring genes Neighboring gene Golgi-associated plant pathogenesis-related protein 1 Neighboring gene uncharacterized LOC121846255 Neighboring gene C-reactive protein-like Neighboring gene metalloreductase STEAP4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cupric reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferric-chelate reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in copper ion import IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metalloreductase STEAP4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056431.1 Reference Otsh_v2.0 Primary Assembly

    Range
    15784925..15805891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024393726.2 → XP_024249494.1  metalloreductase STEAP4-like isoform X2

    UniProtKB/TrEMBL
    A0A8C8CSK2, A0A8C8D4E6
    Conserved Domains (2) summary
    COG2085
    Location:36 → 169
    COG2085; Predicted dinucleotide-binding enzyme [General function prediction only]
    pfam01794
    Location:168 → 301
    Ferric_reduct; Ferric reductase like transmembrane component

  2. XM_024393718.2 → XP_024249486.1  metalloreductase STEAP4-like isoform X1

    UniProtKB/TrEMBL
    A0A8C8CSK2, A0A8C8D5C4
    Related
    ENSOTSP00005021540.1, ENSOTST00005023382.2
    Conserved Domains (2) summary
    COG2085
    Location:36 → 207
    COG2085; Predicted dinucleotide-binding enzyme [General function prediction only]
    pfam01794
    Location:261 → 394
    Ferric_reduct; Ferric reductase like transmembrane component
Nucleotide Protein
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