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LOC112218887 G1/S-specific cyclin-D1 [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112218887, updated on 18-Jun-2024

Summary

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Gene symbol
LOC112218887
Gene description
G1/S-specific cyclin-D1
See related
Ensembl:ENSOTSG00005024040
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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Location:
chromosome: LG19
Exon count:
5
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG19 NC_056447.1 (48421908..48434171, complement)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 19 NC_037115.1 (47788417..47800631, complement)

Linkage Group LG19 - NC_056447.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 4B Neighboring gene uncharacterized LOC121840090 Neighboring gene vegetative cell wall protein gp1-like Neighboring gene transfer RNA proline (anticodon UGG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic cell cycle phase transition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin-dependent protein kinase holoenzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G1/S-specific cyclin-D1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056447.1 Reference Otsh_v2.0 Primary Assembly

    Range
    48421908..48434171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024380115.2 → XP_024235883.1  G1/S-specific cyclin-D1

    UniProtKB/TrEMBL
    A0A8C8LXZ6
    Related
    ENSOTSP00005049750.1, ENSOTST00005054093.2
    Conserved Domains (2) summary
    cd20573
    Location:4 → 151
    CYCLIN_CCND1_rpt1; first cyclin box found in G1/S-specific cyclin-D1 (CCND1)
    cl40454
    Location:156 → 264
    CYCLIN_SF; Cyclin box fold superfamily
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases