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LOC111912207 caffeoylshikimate esterase [ Lactuca sativa (garden lettuce) ]

Gene ID: 111912207, updated on 23-Nov-2023

Summary

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Gene symbol
LOC111912207
Gene description
caffeoylshikimate esterase
Locus tag
LSAT_V11C200093060
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111912207 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 2 NC_056624.2 (212627262..212630159)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 2 NC_056624.1 (195165771..195168660)

Chromosome 2 - NC_056624.2Genomic Context describing neighboring genes Neighboring gene exocyst complex component EXO70H1 Neighboring gene 60S ribosomal protein L35-2 Neighboring gene pentatricopeptide repeat-containing protein At2g33680 Neighboring gene dirigent protein 24 Neighboring gene uncharacterized LOC111912239

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caffeoylshikimate esterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056624.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    212627262..212630159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023907930.3 → XP_023763698.2  caffeoylshikimate esterase

    UniProtKB/TrEMBL
    A0A9R1WF23
    Conserved Domains (1) summary
    cl21494
    Location:8 → 294
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
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