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LOC111798241 leucine-rich repeat receptor-like protein kinase TDR [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

Gene ID: 111798241, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111798241
Gene description
leucine-rich repeat receptor-like protein kinase TDR
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita pepo subsp. pepo (sub-species: pepo)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111798241 in Genome Data Viewer
Location:
chromosome: LG07
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM280686v2 (GCF_002806865.1) LG07 NC_036644.1 (9964265..9967455, complement)

Chromosome LG07 - NC_036644.1Genomic Context describing neighboring genes Neighboring gene cysteine-rich receptor-like protein kinase 4 Neighboring gene DNA replication licensing factor MCM5 Neighboring gene protein ENHANCED DISEASE RESISTANCE 2-like Neighboring gene uncharacterized LOC111798562 Neighboring gene adenylate kinase 5, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036644.1 Chromosome LG07 Reference ASM280686v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat receptor-like protein kinase TDR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM280686v2 Primary Assembly

Genomic

  1. NC_036644.1 Reference ASM280686v2 Primary Assembly

    Range
    9964265..9967455 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023681272.1 → XP_023537040.1  leucine-rich repeat receptor-like protein kinase TDR

    Conserved Domains (3) summary
    sd00031
    Location:462 → 477
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:102 → 125
    LRR_RI; leucine-rich repeat [structural motif]
    cl26793
    Location:6 → 938
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
Nucleotide Protein
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