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LOC111780897 biotin--protein ligase 2-like [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

Gene ID: 111780897, updated on 18-Sep-2024

Summary

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Gene symbol
LOC111780897
Gene description
biotin--protein ligase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita pepo subsp. pepo (sub-species: pepo)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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Location:
chromosome: LG01
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM280686v2 (GCF_002806865.1) LG01 NC_036638.1 (17264605..17271306, complement)

Chromosome LG01 - NC_036638.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol 4-phosphate 5-kinase 1 Neighboring gene oxysterol-binding protein-related protein 1C-like Neighboring gene probable serine/threonine-protein kinase mps1 Neighboring gene uncharacterized LOC111789980

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036638.1 Chromosome LG01 Reference ASM280686v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables biotin--[biotin carboxyl-carrier protein] ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
biotin--protein ligase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM280686v2 Primary Assembly

Genomic

  1. NC_036638.1 Reference ASM280686v2 Primary Assembly

    Range
    17264605..17271306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023661249.1 → XP_023517017.1  biotin--protein ligase 2-like

    Conserved Domains (2) summary
    pfam02237
    Location:326 → 380
    BPL_C; Biotin protein ligase C terminal domain
    cd16442
    Location:133 → 308
    BPL; biotin protein ligase
Nucleotide Protein
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