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LOC111331032 retinoblastoma-associated protein-like [ Stylophora pistillata ]

Gene ID: 111331032, updated on 7-Dec-2023

Summary

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Gene symbol
LOC111331032
Gene description
retinoblastoma-associated protein-like
Locus tag
AWC38_SpisGene1127
See related
EnsemblRapid:LOC111331032
Gene type
protein coding
RefSeq status
MODEL
Organism
Stylophora pistillata
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Stylophora
Also known as
RB1
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
100 current Stylophora pistillata v1 (GCF_002571385.1) Unplaced Scaffold NW_019217790.1 (904409..924033, complement)

NW_019217790.1Genomic Context describing neighboring genes Neighboring gene histamine H2 receptor-like Neighboring gene uncharacterized LOC111331062 Neighboring gene lactadherin-like Neighboring gene uncharacterized LOC111331968

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019217790 Unplaced Scaffold Reference Stylophora pistillata v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of microRNAs in the coral Stylophora pistillata. Liew YJ, et al. PLoS One, 2014. PMID 24658574, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis involved in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Rb-E2F complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinoblastoma-associated protein-like
Names
Retinoblastoma-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stylophora pistillata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stylophora pistillata v1 Primary Assembly

Genomic

  1. NW_019217790.1 Reference Stylophora pistillata v1 Primary Assembly

    Range
    904409..924033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022936077.1 → XP_022791812.1  retinoblastoma-associated protein-like isoform X4

    UniProtKB/TrEMBL
    A0A2B4SZQ3
    Related
    XP_022791812.1, XM_022936077.1
    Conserved Domains (4) summary
    pfam01857
    Location:550 → 664
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:335 → 526
    RB_A; Retinoblastoma-associated protein A domain
    pfam08934
    Location:668 → 784
    Rb_C; Rb C-terminal domain
    pfam11934
    Location:70 → 186
    DUF3452; Domain of unknown function (DUF3452)

  2. XM_022936071.1 → XP_022791806.1  retinoblastoma-associated protein-like isoform X3

    Related
    XP_022791806.1, XM_022936071.1
    Conserved Domains (4) summary
    pfam01857
    Location:551 → 665
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:336 → 527
    RB_A; Retinoblastoma-associated protein A domain
    pfam08934
    Location:669 → 785
    Rb_C; Rb C-terminal domain
    pfam11934
    Location:70 → 186
    DUF3452; Domain of unknown function (DUF3452)

  3. XM_022936063.1 → XP_022791798.1  retinoblastoma-associated protein-like isoform X2

    Related
    XP_022791798.1, XM_022936063.1
    Conserved Domains (4) summary
    pfam01857
    Location:552 → 666
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:337 → 528
    RB_A; Retinoblastoma-associated protein A domain
    pfam08934
    Location:670 → 786
    Rb_C; Rb C-terminal domain
    pfam11934
    Location:70 → 186
    DUF3452; Domain of unknown function (DUF3452)

  4. XM_022936084.1 → XP_022791819.1  retinoblastoma-associated protein-like isoform X5

    Related
    XP_022791819.1, XM_022936084.1
    Conserved Domains (4) summary
    pfam01857
    Location:547 → 661
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:338 → 523
    RB_A; Retinoblastoma-associated protein A domain
    pfam08934
    Location:665 → 781
    Rb_C; Rb C-terminal domain
    pfam11934
    Location:70 → 186
    DUF3452; Domain of unknown function (DUF3452)

  5. XM_022936058.1 → XP_022791793.1  retinoblastoma-associated protein-like isoform X1

    Related
    XP_022791793.1, XM_022936058.1
    Conserved Domains (4) summary
    pfam01857
    Location:553 → 667
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:338 → 529
    RB_A; Retinoblastoma-associated protein A domain
    pfam08934
    Location:671 → 787
    Rb_C; Rb C-terminal domain
    pfam11934
    Location:70 → 186
    DUF3452; Domain of unknown function (DUF3452)
Nucleotide Protein
Heading Accession and Version

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