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LOC111329917 TNF receptor-associated factor 6-like [ Stylophora pistillata ]

Gene ID: 111329917, updated on 7-Dec-2023

Summary

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Gene symbol
LOC111329917
Gene description
TNF receptor-associated factor 6-like
Locus tag
AWC38_SpisGene9617
See related
EnsemblRapid:LOC111329917
Gene type
protein coding
RefSeq status
MODEL
Organism
Stylophora pistillata
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Stylophora
Also known as
TRAF4
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Stylophora pistillata v1 (GCF_002571385.1) Unplaced Scaffold NW_019217926.1 (438145..442830, complement)

NW_019217926.1Genomic Context describing neighboring genes Neighboring gene CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial-like Neighboring gene uncharacterized LOC111329936 Neighboring gene uncharacterized LOC111329937 Neighboring gene uncharacterized LOC111329956

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019217926 Unplaced Scaffold Reference Stylophora pistillata v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of plasma membrane signaling receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TNF receptor-associated factor 4-like; TNF receptor-associated factor 6-like
Names
TNF receptor-associated factor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stylophora pistillata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stylophora pistillata v1 Primary Assembly

Genomic

  1. NW_019217926.1 Reference Stylophora pistillata v1 Primary Assembly

    Range
    438145..442830 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022934683.1 → XP_022790418.1  TNF receptor-associated factor 6-like isoform X2

    Related
    XP_022790418.1, XM_022934683.1
    Conserved Domains (1) summary
    cd00270
    Location:90 → 234
    MATH_TRAF_C; Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link cell surface TNFRs and receptors of the interleukin-1/Toll-like family to downstream kinase ...

  2. XM_022934682.1 → XP_022790417.1  TNF receptor-associated factor 4-like isoform X1

    Related
    XP_022790417.1, XM_022934682.1
    Conserved Domains (1) summary
    cd00270
    Location:115 → 259
    MATH_TRAF_C; Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link cell surface TNFRs and receptors of the interleukin-1/Toll-like family to downstream kinase ...
Nucleotide Protein
Heading Accession and Version

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