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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001278439.2 → NP_001265368.1 CLK4-associating serine/arginine rich protein isoform 2
See identical proteins and their annotated locations for NP_001265368.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame segment compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AF042800, AK293333
- Consensus CDS
-
CCDS62710.1
- UniProtKB/Swiss-Prot
-
Q8N2M8
- Related
- ENSP00000375815.3, ENST00000391953.8
- Conserved Domains (1) summary
-
- pfam09750
Location:43 → 107
- DRY_EERY; Alternative splicing regulator
-
NM_007056.3 → NP_008987.2 CLK4-associating serine/arginine rich protein isoform 1
See identical proteins and their annotated locations for NP_008987.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AF042800
- Consensus CDS
-
CCDS12652.2
- UniProtKB/Swiss-Prot
-
Q8N2M8
- UniProtKB/TrEMBL
-
A0A0A0MQS2
- Related
- ENSP00000221455.3, ENST00000221455.8
- Conserved Domains (1) summary
-
- pfam09750
Location:41 → 169
- DRY_EERY; Alternative splicing regulator
RNA
-
NR_103529.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate splice junction at the 3' end of an exon compared to variant 1, that causes a frameshift. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AF042800, AY358944
- Related
-
ENST00000391952.7
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p13 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p13 Primary Assembly
- Range
-
45039045..45070956
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011526396.2 → XP_011524698.1 CLK4-associating serine/arginine rich protein isoform X1
- Conserved Domains (1) summary
-
- pfam09750
Location:41 → 169
- DRY_EERY; Alternative splicing regulator
-
XM_011526397.3 → XP_011524699.1 CLK4-associating serine/arginine rich protein isoform X2
RNA
-
XR_002958247.1 RNA Sequence