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asmt2 acetylserotonin O-methyltransferase 2 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111225582, updated on 15-Mar-2024

Summary

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Gene symbol
asmt2
Gene description
acetylserotonin O-methyltransferase 2
See related
Ensembl:ENSSDUG00000004145
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
zebrafish all
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Genomic context

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See asmt2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174404.1 (1802690..1808891, complement)

NW_019174404.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor binding SET domain protein 2 Neighboring gene jade family PHD finger 1 Neighboring gene progesterone receptor membrane component 2 Neighboring gene La ribonucleoprotein 1B Neighboring gene uncharacterized LOC111225675

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174404 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylserotonin O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in melatonin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylserotonin O-methyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174404.1 Reference Sdu_1.0 Primary Assembly

    Range
    1802690..1808891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022750545.1 → XP_022606266.1  acetylserotonin O-methyltransferase-like

    UniProtKB/TrEMBL
    A0A3B4TI48
    Related
    ENSSDUP00000005630.1, ENSSDUT00000005738.1
    Conserved Domains (2) summary
    pfam16864
    Location:15 → 104
    Dimerisation2; Dimerisation domain
    cl17173
    Location:109 → 334
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_022750544.1 → XP_022606265.1  acetylserotonin O-methyltransferase-like

    UniProtKB/TrEMBL
    A0A3B4TI48
    Conserved Domains (2) summary
    pfam16864
    Location:15 → 104
    Dimerisation2; Dimerisation domain
    cl17173
    Location:109 → 334
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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