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LOC111151525 C-C motif chemokine 4 [ Enhydra lutris kenyoni (northern sea otter) ]

Gene ID: 111151525, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111151525
Gene description
C-C motif chemokine 4
See related
EnsemblRapid:ENSELKG00000012504
Gene type
protein coding
RefSeq status
MODEL
Organism
Enhydra lutris kenyoni (sub-species: kenyoni)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Enhydra
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM228890v2 (GCF_002288905.1) Unplaced Scaffold NW_019154110.1 (9910310..9913281)

NW_019154110.1Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine 3-like Neighboring gene C-C motif chemokine 3 Neighboring gene uncharacterized LOC111151213 Neighboring gene HEAT repeat containing 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019154110 Unplaced Scaffold Reference ASM228890v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CCR chemokine receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chemokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to interleukin-1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to tumor necrosis factor IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to type II interferon IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lymphocyte chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neutrophil chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-C motif chemokine 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Enhydra lutris kenyoni Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228890v2 Primary Assembly

Genomic

  1. NW_019154110.1 Reference ASM228890v2 Primary Assembly

    Range
    9910310..9913281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022509574.1 → XP_022365282.1  C-C motif chemokine 4 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9JW06
    Related
    ENSELKP00000016583.1, ENSELKT00000018407.1
    Conserved Domains (1) summary
    smart00199
    Location:31 → 89
    SCY; Intercrine alpha family (small cytokine C-X-C) (chemokine CXC)

  2. XM_022509575.1 → XP_022365283.1  C-C motif chemokine 4 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9JW97
    Conserved Domains (1) summary
    smart00199
    Location:31 → 84
    SCY; Intercrine alpha family (small cytokine C-X-C) (chemokine CXC)
Nucleotide Protein
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