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LOC111049201 hippocampus abundant transcript 1 protein [ Nilaparvata lugens (brown planthopper) ]

Gene ID: 111049201, updated on 7-Dec-2023

Summary

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Gene symbol
LOC111049201
Gene description
hippocampus abundant transcript 1 protein
See related
EnsemblRapid:LOC111049201
Gene type
protein coding
RefSeq status
MODEL
Organism
Nilaparvata lugens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Auchenorrhyncha; Fulgoroidea; Delphacidae; Delphacinae; Nilaparvata
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Genomic context

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See LOC111049201 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM1435652v1 (GCF_014356525.1) 6 NC_052509.1 (43117485..43165051, complement)
100 previous assembly NilLug1.0 (GCF_000757685.1) Unplaced Scaffold NW_019106142.1 (355150..399518)

Chromosome 6 - NC_052509.1Genomic Context describing neighboring genes Neighboring gene quinone oxidoreductase Neighboring gene zinc finger protein on ecdysone puffs Neighboring gene uncharacterized LOC120352039 Neighboring gene uncharacterized LOC111049200 Neighboring gene uncharacterized LOC120351930

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptomic and Expression Analysis of the Salivary Glands in Brown Planthoppers, Nilaparvata lugens (Hemiptera: Delphacidae). Miao Y, et al. J Econ Entomol, 2018 Dec 14. PMID 30265342
  2. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: hippocampus abundant transcript 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nilaparvata lugens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1435652v1 Primary Assembly

Genomic

  1. NC_052509.1 Reference ASM1435652v1 Primary Assembly

    Range
    43117485..43165051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039430843.1 → XP_039286777.1  LOW QUALITY PROTEIN: hippocampus abundant transcript 1 protein

    Related
    XP_039286777.1, XM_039430843.1
    Conserved Domains (1) summary
    cl28910
    Location:36 → 403
    MFS; Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases