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LOC111019177 exopolygalacturonase-like [ Momordica charantia (bitter melon) ]

Gene ID: 111019177, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111019177
Gene description
exopolygalacturonase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Momordica charantia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104489.1 (854371..856135, complement)

NW_019104489.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene poly [ADP-ribose] polymerase 2-like Neighboring gene polygalacturonase-like Neighboring gene indole-3-acetic acid-induced protein ARG2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019104489 Unplaced Scaffold Reference ASM199503v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exopolygalacturonase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM199503v1

Genomic

  1. NW_019104489.1 Reference ASM199503v1

    Range
    854371..856135 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022295507.1 → XP_022151199.1  exopolygalacturonase-like

    UniProtKB/TrEMBL
    A0A6J1DCB0
    Conserved Domains (1) summary
    cl19188
    Location:33 → 396
    PL-6; Polysaccharide Lyase Family 6
Nucleotide Protein Strain
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Molecular Biology Databases