U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

snrpc small nuclear ribonucleoprotein polypeptide C [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110962065, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
snrpc
Gene description
small nuclear ribonucleoprotein polypeptide C
See related
Ensembl:ENSAPOG00000013907
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 5 NC_067117.1 (36052013..36058142, complement)

Chromosome 5 - NC_067117.1Genomic Context describing neighboring genes Neighboring gene T-complex protein 11-like protein 1 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 1Ab Neighboring gene inflammation and lipid regulator with UBA-like and NBR1-like domains Neighboring gene SAM pointed domain-containing Ets transcription factor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_067117.1 Chromosome 5 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pre-mRNA 5'-splice site binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 5'-splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal snRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
U1 small nuclear ribonucleoprotein C

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067117.1 Reference KAUST_Apoly_ChrSc

    Range
    36052013..36058142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022209930.2 → XP_022065622.1  U1 small nuclear ribonucleoprotein C

    UniProtKB/TrEMBL
    A0A3Q1GE76
    Related
    ENSAPOP00000028608.1
    Conserved Domains (1) summary
    pfam06220
    Location:1 → 38
    zf-U1; U1 zinc finger
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.