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rcl1 RNA terminal phosphate cyclase-like 1 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110953806, updated on 15-Mar-2024

Summary

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Gene symbol
rcl1
Gene description
RNA terminal phosphate cyclase-like 1
See related
Ensembl:ENSAPOG00000015666
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 18
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 18 NC_067130.1 (9118567..9130141)

Chromosome 18 - NC_067130.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 37-like 1 Neighboring gene adenylate kinase 3 Neighboring gene annexin A3b Neighboring gene suppressor APC domain containing 2 Neighboring gene transmembrane protein 141

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067130.1 Chromosome 18 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA 3'-terminal phosphate cyclase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067130.1 Reference KAUST_Apoly_ChrSc

    Range
    9118567..9130141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051938604.1 → XP_051794564.1  RNA 3'-terminal phosphate cyclase-like protein isoform X2

  2. XM_022197993.2 → XP_022053685.2  RNA 3'-terminal phosphate cyclase-like protein isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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