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LOC110922081 calcium-binding protein PBP1 [ Helianthus annuus (common sunflower) ]

Gene ID: 110922081, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110922081
Gene description
calcium-binding protein PBP1
Locus tag
HanXRQr2_Chr17g0792281
Gene type
protein coding
RefSeq status
MODEL
Organism
Helianthus annuus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Genomic context

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Location:
chromosome: 17
Exon count:
1
Annotation release Status Assembly Chr Location
101 current HanXRQr2.0-SUNRISE (GCF_002127325.2) 17 NC_035449.2 (25487291..25487818)
100 previous assembly HanXRQr1.0 (GCF_002127325.1) Linkage Group 17 NC_035449.1 (32703834..32704345, complement)

Chromosome 17 - NC_035449.2Genomic Context describing neighboring genes Neighboring gene zinc finger protein CONSTANS-LIKE 1 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase B120 Neighboring gene small nucleolar RNA R71 Neighboring gene putative F-box/FBD/LRR-repeat protein At4g03220

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-binding protein PBP1
Names
putative EF-hand domain pair
putative guanylate cyclase activating protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Helianthus annuus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HanXRQr2.0-SUNRISE Primary Assembly

Genomic

  1. NC_035449.2 Reference HanXRQr2.0-SUNRISE Primary Assembly

    Range
    25487291..25487818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022166409.2 → XP_022022101.1  calcium-binding protein PBP1

    UniProtKB/TrEMBL
    A0A251RNA9
    Conserved Domains (1) summary
    pfam13833
    Location:48 → 101
    EF-hand_8; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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