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LOC110885853 putative receptor-like protein kinase At4g00960 [ Helianthus annuus (common sunflower) ]

Gene ID: 110885853, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110885853
Gene description
putative receptor-like protein kinase At4g00960
Locus tag
HanXRQr2_Chr10g0450031
Gene type
protein coding
RefSeq status
MODEL
Organism
Helianthus annuus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Also known as
CRK25
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Genomic context

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Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
101 current HanXRQr2.0-SUNRISE (GCF_002127325.2) 10 NC_035442.2 (143131236..143172661, complement)
100 previous assembly HanXRQr1.0 (GCF_002127325.1) Linkage Group 10 NC_035442.1 (187687973..187729233)

Chromosome 10 - NC_035442.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110882749 Neighboring gene glutamate receptor 2.8 Neighboring gene uncharacterized LOC118483108 Neighboring gene glutamate receptor 2.7 Neighboring gene glutamate receptor 2.7-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative receptor-like protein kinase At4g00960
Names
putative cysteine-rich RLK (RECEPTOR-like protein kinase) 25
putative gnk2-like domain-containing protein
putative protein kinase RLK-Pelle-DLSV family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Helianthus annuus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HanXRQr2.0-SUNRISE Primary Assembly

Genomic

  1. NC_035442.2 Reference HanXRQr2.0-SUNRISE Primary Assembly

    Range
    143131236..143172661 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022133576.2 → XP_021989268.1  putative receptor-like protein kinase At4g00960 isoform X4

    Conserved Domains (2) summary
    cd14066
    Location:309 → 576
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam01657
    Location:37 → 129
    Stress-antifung; Salt stress response/antifungal

  2. XM_022133574.2 → XP_021989266.1  putative receptor-like protein kinase At4g00960 isoform X2

    Conserved Domains (2) summary
    cd14066
    Location:354 → 621
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam01657
    Location:37 → 129
    Stress-antifung; Salt stress response/antifungal

  3. XM_022133575.2 → XP_021989267.1  putative receptor-like protein kinase At4g00960 isoform X3

    Conserved Domains (2) summary
    cd14066
    Location:309 → 576
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam01657
    Location:38 → 128
    Stress-antifung; Salt stress response/antifungal

  4. XM_022133573.2 → XP_021989265.1  putative receptor-like protein kinase At4g00960 isoform X1

    UniProtKB/TrEMBL
    A0A251TM49
    Conserved Domains (2) summary
    cd14066
    Location:354 → 621
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam01657
    Location:40 → 128
    Stress-antifung; Salt stress response/antifungal
Nucleotide Protein
Heading Accession and Version

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