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LOC110823716 glutamate decarboxylase 4 [ Carica papaya (papaya) ]

Gene ID: 110823716, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110823716
Gene description
glutamate decarboxylase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Carica papaya
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Papaya1.0 (GCF_000150535.2) Unplaced Scaffold NW_019014690.1 (1306643..1309512, complement)

NW_019014690.1Genomic Context describing neighboring genes Neighboring gene non-specific lipid-transfer protein 1 Neighboring gene valine--tRNA ligase, mitochondrial 1 Neighboring gene protein NRT1/ PTR FAMILY 8.3-like Neighboring gene eukaryotic translation initiation factor 3 subunit I-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019014690 Unplaced Scaffold Reference Papaya1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutamate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutamate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: glutamate decarboxylase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carica papaya Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Papaya1.0 Primary Assembly

Genomic

  1. NW_019014690.1 Reference Papaya1.0 Primary Assembly

    Range
    1306643..1309512 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022054166.1 → XP_021909858.1  LOW QUALITY PROTEIN: glutamate decarboxylase 4

    Conserved Domains (1) summary
    TIGR01788
    Location:16 → 445
    Glu-decarb-GAD; glutamate decarboxylase
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases