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LOC110707088 farnesyl pyrophosphate synthase 1-like [ Chenopodium quinoa (quinoa) ]

Gene ID: 110707088, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110707088
Gene description
farnesyl pyrophosphate synthase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Chenopodium quinoa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Genomic context

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See LOC110707088 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM168347v1 (GCF_001683475.1) Unplaced Scaffold NW_018744991.1 (3497340..3518270)

NW_018744991.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 CYP72A219-like Neighboring gene uncharacterized LOC110707087 Neighboring gene uncharacterized LOC110707037 Neighboring gene protein CWC15 homolog Neighboring gene uncharacterized LOC110707039

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018744991 Unplaced Scaffold Reference ASM168347v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dimethylallyltranstransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables geranyltranstransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in farnesyl diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
farnesyl pyrophosphate synthase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chenopodium quinoa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM168347v1 Primary Assembly

Genomic

  1. NW_018744991.1 Reference ASM168347v1 Primary Assembly

    Range
    3497340..3518270
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021885124.1 → XP_021740816.1  farnesyl pyrophosphate synthase 1-like

    Conserved Domains (1) summary
    pfam00348
    Location:34 → 298
    polyprenyl_synt; Polyprenyl synthetase
Nucleotide Protein
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