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LOC110629877 GTP cyclohydrolase 1 [ Manihot esculenta (cassava) ]

Gene ID: 110629877, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110629877
Gene description
GTP cyclohydrolase 1
Locus tag
MANES_13G051100v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC110629877 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 13 NC_035173.2 (5853153..5854086)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG13 NC_035173.1 (5481527..5482981)

Chromosome 13 - NC_035173.2Genomic Context describing neighboring genes Neighboring gene SKI/DACH domain-containing protein 1 Neighboring gene cell surface glycoprotein 1-like Neighboring gene myb-like protein X Neighboring gene anthocyanidin-3-O-glucoside rhamnosyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP cyclohydrolase I activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tetrahydrobiopterin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tetrahydrofolate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTP cyclohydrolase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035173.2 Reference M.esculenta_v8 Primary Assembly

    Range
    5853153..5854086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043949782.1 → XP_043805717.1  GTP cyclohydrolase 1

    Conserved Domains (1) summary
    PLN02531
    Location:1 → 230
    PLN02531; GTP cyclohydrolase I
Nucleotide Protein
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