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LOC110601604 D-2-hydroxyglutarate dehydrogenase, mitochondrial [ Manihot esculenta (cassava) ]

Gene ID: 110601604, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110601604
Gene description
D-2-hydroxyglutarate dehydrogenase, mitochondrial
Locus tag
MANES_01G140700v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 1 NC_035161.2 (33209117..33220787)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG1 NC_035161.1 (25367073..25378723)

Chromosome 1 - NC_035161.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110617507 Neighboring gene CDK5RAP1-like protein Neighboring gene probable ubiquitin-conjugating enzyme E2 16 Neighboring gene translation initiation factor IF3-1, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
D-2-hydroxyglutarate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035161.2 Reference M.esculenta_v8 Primary Assembly

    Range
    33209117..33220787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021738802.2 → XP_021594494.1  D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2C9WNB0
    Conserved Domains (1) summary
    COG0277
    Location:120 → 574
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]

  2. XM_043958503.1 → XP_043814438.1  D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A2C9WNB0
    Conserved Domains (1) summary
    COG0277
    Location:120 → 503
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]

  3. XM_021738807.2 → XP_021594499.1  D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2C9WNB0
    Conserved Domains (1) summary
    COG0277
    Location:120 → 573
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
Nucleotide Protein
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