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LOC110493646 interleukin-1 receptor-associated kinase 4 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110493646, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110493646
Gene description
interleukin-1 receptor-associated kinase 4
See related
Ensembl:ENSOMYG00000030965
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
irak4; irak4s
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Genomic context

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See LOC110493646 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 2 NC_048566.1 (64180281..64188853, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 2 NC_035078.1 (48653169..48659119, complement)

Chromosome 2 - NC_048566.1Genomic Context describing neighboring genes Neighboring gene neural EGFL like 2a Neighboring gene transmembrane protein 117 Neighboring gene twinfilin-1 Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 20 Neighboring gene testis expressed metallothionein like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interleukin-1 receptor-associated kinase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048566.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    64180281..64188853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021568039.2 → XP_021423714.2  interleukin-1 receptor-associated kinase 4

    UniProtKB/TrEMBL
    A0A060YIW1
    Related
    ENSOMYP00000066865.2, ENSOMYT00000072816.2
    Conserved Domains (2) summary
    cd08793
    Location:9 → 105
    Death_IRAK4; Death domain of Interleukin-1 Receptor-Associated Kinase 4
    cl21453
    Location:171 → 459
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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